Plant bioinformatics : methods and protocols /

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Bibliographic Details
Other Authors: Edwards, David
Format: Book
Language:English
Published: Totowa, N.J. Humana Press 2007.
Series:Methods in molecular biology 406.
Subjects:
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Table of Contents:
  • The EMBL nucleotide sequence and genome reviews databases / Peter Sterk ... [et al.]
  • Using GenBank / David Wheeler
  • A collection of plant-specific genomic data and resources at NCBI / Tatiana Tatusova, Brian Smith-White, and James Ostell
  • UniProtKB/Swiss-Prot / Emmanuel Boutet ... [et al.]
  • Plant database resources at The Institute for Genomic Research / Agnes P. Chan... [et al.]
  • MIPS plant genome information resources / Manuel Spannagl ...[et al.]
  • HarvEST / Timothy J. Close ... [et al.]
  • The TAIR database / Rebecca L. Poole
  • AtEnsEMBL / Nick James ... [et al.]
  • Accessing integrated Brassica genetic and genomic data using the BASC server / Christopher G. Love and David Edwards
  • Leveraging model legume information to find candidate genes for soybean sudden death syndrome using the Legume Information System / Michael D. Gonzales ... [et al.]
  • Legume resources : MtDB and Medicago.org / Ernest F. Retzel ... [et al.]
  • BGI-RIS V2 / Ximiao He and Jun Wang
  • GrainGenes / Helen O'Sullivan
  • Gramene / Doreen Ware
  • MaizGDB / Carolyn J. Lawrence
  • BarleyBase/PLEXdb / Roger P. Wise ... [et al.]
  • Reaping the benefits of SAGE / Stephen J. Robinson ... [et al.]
  • Methods for analysis of gene expression in plants using MPSS / Kan Nobuta, Kalyan Vemaraju, and Blake C. Meyers
  • Metabolomics data analysis, visualization, and integration / Lloyd W. Sumner, Ewa Urbanczyk-Wochniak, and Corey D. Broeckling
  • KEGG bioinformatics resource for plant genomics research / Ali Masoudi-Nejad ... [et al.]
  • International Crop Information System for germplasms data management / Arllet Portugal ... [et al.]
  • Automated discovery of single nucleotide polymorphism and simple sequence repeat molecular genetic markers / Jacqueline Batley, Erica Jewell, and David Edwards
  • Methods for gene ontology annotation / Emily Dimmer ... [et al.]
  • Gene structure annotation at PlantGDB / Volker Brendel
  • An introduction to BioPerl / Jason E. Stajich.